| AEL_GSE142213 | Acute Erythroid Leukemia | 2 | 3994 | None | Primary | 10x Genomics | 13813 | 11946 | 1450 | | 32330454 | |
| ALL_GSE132509 | Acute Lymphoblastic Leukemia | 11 | 37936 | None | Primary | 10x Genomics | 20080 | 14413 | 1070 | | 32415257 | |
| AML_GSE116256 | Acute Myeloid Leukemia | 21 | 38348 | None | Primary | Smart-seq2 | 19288 | 15072 | 1502 | | 30827681 | |
| AML_GSE147989 | Acute Myeloid Leukemia | 2 | 7389 | Targeted therapy | Primary | 10x Genomics | 16190 | 12641 | 728 | | 32601337 | |
| MM_GSE110499_10X | Acute Myeloid Leukemia | 3 | 1184 | None | Primary | 10x Genomics | 10653 | 10343 | 311 | | 29898899 | |
| MM_GSE110499_Smart | Acute Myeloid Leukemia | 3 | 169 | None | Primary | Smart-seq | 12792 | 12116 | 677 | | 29898899 | |
| BLCA_GSE130001 | Bladder Urothelial Carcinoma | 2 | 4129 | None | Primary | 10x Genomics | 16314 | 13142 | 490 | | 32111252 | |
| BLCA_GSE145281_aPDL1 | Bladder Urothelial Carcinoma | 10 | 14474 | Immunotherapy | Metastatic | 10x Genomics | 13502 | 11141 | 417 | | 32405063 | |
| BP_GSE167118_BALF_moderate | Bacterial pneumonia | 3 | 5560 | None | Moderate | 10x Genomics | 10500 | 9899 | 454 | | 33622974 | |
| BP_GSE167118_BALF_no | Bacterial pneumonia | 1 | 3349 | None | X | 10x Genomics | 10475 | 9907 | 436 | | 33622974 | |
| BP_GSE167118_blood_moderate | Bacterial pneumonia | 3 | 14866 | None | Moderate | 10x Genomics | 10399 | 9789 | 479 | | 33622974 | |
| BP_GSE167118_blood_no | Bacterial pneumonia | 1 | 6988 | None | X | 10x Genomics | 10765 | 10048 | 580 | | 33622974 | |
| BRCA_GSE110686 | Breast Invasive Carcinoma | 2 | 6035 | None | Primary, Metastatic | 10x Genomics | 12750 | 10942 | 392 | | 29942092 | |
| BRCA_GSE114727_10X | Breast Invasive Carcinoma | 3 | 28678 | None | Primary | 10x Genomics | 16270 | 12543 | 721 | | 29961579 | |
| BRCA_GSE114727_inDrop | Breast Invasive Carcinoma | 8 | 19676 | None | Primary | inDrop | 20415 | 14121 | 833 | | 29961579 | |
| BRCA_GSE138536 | Breast Invasive Carcinoma | 8 | 1902 | None | Primary | Smart-seq2 | 25457 | 14504 | 1535 | | 31974247 | |
| BRCA_GSE143423 | Breast Invasive Carcinoma | 1 | 4375 | None | Metastatic | 10x Genomics | 14452 | 13715 | 23 | | 10.1101/2019.12.30.890517 | |
| BRCA_SRP114962 | Breast Invasive Carcinoma | 8 | 2472 | Chemotherapy | Primary | SNRS | 12472 | 10061 | 1903 | | 29681456 | |
| BRCA_GSE136206_mouse_aPD1aCTLA4 | Breast Invasive Carcinoma | X | 27532 | Immunotherapy | Primary | 10x Genomics | 17191 | 13187 | 27 | | 31730857 | |
| CHOL_GSE125449_aPD1aPDL1aCTLA4 | Cholangiocarcinoma | 10 | 5762 | Immunotherapy | Primary | 10x Genomics | 17530 | 14306 | 738 | | 31588021 | |
| CLL_GSE111014 | Chronic lymphocytic leukemia | 4 | 30106 | Targeted therapy | Primary | 10x Genomics | 15963 | 12476 | 691 | | 31996669 | |
| COVID19_GSE168212 | COVID-19 | 1 | 4935 | None | X | 10x Genomics | 9041 | 8560 | 436 | | NA | |
| COVID19_GSE166992 | COVID-19 | 9 | 20348 | None | X | 10x Genomics | 10524 | 9921 | 474 | | 33691089 | |
| COVID19_GSE154567_severe | COVID-19 | 3 | 15190 | None | Severe | 10x Genomics | 8792 | 8467 | 281 | | 33357411 | |
| COVID19_GSE154567_moderate | COVID-19 | 3 | 22809 | None | Moderate | 10x Genomics | 10028 | 9507 | 465 | | 33357411 | |
| COVID19_GSE154567_recovery | COVID-19 | 3 | 29275 | None | Recover | 10x Genomics | 10109 | 9622 | 432 | | 33357411 | |
| COVID19_GSE167118_BALF_moderate | COVID-19 | 2 | 3016 | None | Moderate | 10x Genomics | 11058 | 10381 | 555 | | 33622974 | |
| COVID19_GSE167118_BALF_severe | COVID-19 | 6 | 23581 | None | Severe | 10x Genomics | 10746 | 10109 | 491 | | 33622974 | |
| COVID19_GSE167118_blood_moderate | COVID-19 | 1 | 7270 | None | Moderate | 10x Genomics | 10263 | 9623 | 513 | | 33622974 | |
| COVID19_GSE167118_blood_severe | COVID-19 | 6 | 54094 | None | Severe | 10x Genomics | 10504 | 9809 | 558 | | 33622974 | |
| COVID19_GSE169503 | COVID-19 | 4 | 4196 | None | X | 10x Genomics | 9927 | 9431 | 396 | | 33972535 | |
| CRC_GSE108989 | Colorectal Cancer | 12 | 11125 | None | Primary | Smart-seq2 | 19194 | 16941 | 920 | | 30479382 | |
| CRC_GSE139555 | Colorectal Cancer | 2 | 10112 | None | Primary | 10x Genomics | 15408 | 12418 | 542 | | 32103181 | |
| CRC_GSE146771_Smartseq2 | Colorectal Cancer | 10 | 10468 | None | Primary | Smart-seq2 | 15178 | 13998 | 245 | | 32302573 | |
| CRC_GSE112865_mouse_aPD1 | Colorectal Cancer | X | 4454 | Immunotherapy | Primary | 10x Genomics | 11200 | 9603 | 18 | | 30613266 | |
| CRC_GSE120909_mouse_aPD1 | Colorectal Cancer | X | 1881 | Immunotherapy | Primary | Smart-seq | 12245 | 9775 | 36 | | 30389797 | |
| CRC_GSE122969_mouse_aPD1aTIM3 | Colorectal Cancer | X | 5457 | Immunotherapy | Primary | 10x Genomics | 11959 | 9897 | 16 | | 30635236 | |
| CRC_GSE144735 | Colorectal Cancer | 6 | 26408 | None | Primary | 10x Genomics | 33694 | 18405 | 2779 | | 32451460 | |
| GBM_GSE131928_10X | Glioblastoma Multiforme | 9 | 13558 | None | Primary | 10x Genomics | 19453 | 15025 | 780 | | 31327527 | |
| GBM_GSE131928_Smartseq2 | Glioblastoma Multiforme | 28 | 7930 | None | Primary | Smart-seq2 | 18989 | 17097 | 755 | | 31327527 | |
| GBM_GSE135437 | Glioblastoma Multiforme | 19 | 12559 | None | Primary, Metastatic | mCEL-Seq2 | 20855 | 13991 | 1280 | | 31740814 | |
| GBM_GSE138794 | Glioblastoma Multiforme | 9 | 18458 | None | Primary | 10x Genomics | 16156 | 13366 | 636 | | 31554641 | |
| GBM_GSE139448 | Glioblastoma Multiforme | 3 | 13469 | None | Primary | 10x Genomics | 17029 | 14349 | 456 | | 32004492 | |
| GBM_GSE84465 | Glioblastoma Multiforme | 4 | 3533 | None | Primary | Smart-seq2 | 16283 | 15077 | 309 | | 29091775 | |
| GBM_GSE157424 | Glioblastoma Multiforme | 4 | 12268 | None | Primary | HiSeq | 27225 | 17544 | 2149 | | 33312949 | |
| HNSC_GSE103322 | Head and Neck Squamous Cell Carcinoma | 18 | 5902 | None | Primary | Smart-seq2 | 18241 | 16577 | 677 | | 29198524 | |
| KIRC_GSE111360 | Kidney Renal Clear Cell Carcinoma | 2 | 23130 | None | Primary | 10x Genomics | 18104 | 14665 | 2571 | | 30550791 | |
| KIRC_GSE145281_aPDL1 | Kidney Renal Clear Cell Carcinoma | 4 | 44220 | Immunotherapy | Metastatic | 10x Genomics | 20226 | 13817 | 2958 | | 32405063 | |
| KIRC_GSE73121 | Kidney Renal Clear Cell Carcinoma | X | 118 | None | Metastatic | Illumina HiSeq 2500 | 16730 | 13418 | 3310 | | 27139883 | |
| LGG_GSE102130 | Brain Lower Grade Glioma | 6 | 4058 | None | Primary | Smart-seq2 | 18370 | 16637 | 716 | | 29674595 | |
| LGG_GSE103224 | Brain Lower Grade Glioma | 8 | 17185 | None | Primary | Microwell | 28909 | 15335 | 1502 | | 30041684 | |
| LGG_GSE141982 | Brain Lower Grade Glioma | 2 | 5261 | None | Primary | 10x Genomics | 20260 | 14564 | 1249 | | 32105316 | |
| LGG_GSE70630 | Brain Lower Grade Glioma | 6 | 4347 | None | Primary | Smart-seq2 | 17524 | 15898 | 665 | | 27806376 | |
| LGG_GSE89567 | Brain Lower Grade Glioma | 10 | 6341 | None | Primary | Smart-seq2 | 18733 | 16930 | 741 | | 28360267 | |
| LIHC_GSE125449_aPDL1aCTLA4 | Liver Hepatocellular Carcinoma | 9 | 3835 | Immunotherapy | Primary | 10x Genomics | 17356 | 14159 | 744 | | 31588021 | |
| LIHC_GSE140228_Smartseq2 | Liver Hepatocellular Carcinoma | 6 | 7074 | None | Primary | Smart-seq2 | 33080 | 16266 | 1763 | | 31675496 | |
| LIHC_GSE98638 | Liver Hepatocellular Carcinoma | 6 | 5059 | None | Primary | Smart-seq2 | 17254 | 15454 | 662 | | 28622514 | |
| MB_GSE119926 | Medulloblastoma | 25 | 7745 | None | Primary, Metastatic | Smart-seq2 | 19073 | 17206 | 765 | | 31341285 | |
| MCC_GSE117988_aPD1aCTLA4 | Merkel cell carcinoma | 1 | 10148 | Immunotherapy | Metastatic | 10x Genomics | 16746 | 13783 | 657 | | 30250229 | |
| MCC_GSE118056_aPDL1 | Merkel cell carcinoma | 1 | 11024 | Immunotherapy | Primary | 10x Genomics | 18940 | 14614 | 866 | | 30250229 | |
| MEL_GSE157743 | Melanoma | 22 | 102 | None | Primary | Smart-seq2 | 19271 | 18473 | 33 | | 33203734 | |
| MM_GSE117156 | Multiple myeloma | 14 | 24918 | Targeted therapy | Primary | MARS-seq | 23996 | 14023 | 3223 | | 30523328 | |
| MM_GSE141299 | Multiple myeloma | 7 | 16840 | None | Primary | 10x Genomics | 17686 | 13389 | 864 | | 10.1101/2020.02.10.942607 | |
| NET_GSE140312 | Neuroendocrine Tumor | 1 | 3158 | None | Primary, Metastatic | 10x Genomics | 14872 | 13202 | 1279 | | 32054662 | |
| NHL_GSE128531 | Non-Hodgkin Lymphoma | 9 | 30497 | None | Primary | 10x Genomics | 21872 | 15902 | 1215 | | 31010835 | |
| HCL_GSE134355_AdultAdipose1 | Normal | 1 | 1372 | None | Normal | Microwell-seq | 6972 | 6798 | 74 | | 32214235 | |
| HCL_GSE134355_AdultAdrenalGland2 | Normal | 1 | 8114 | None | Normal | Microwell-seq | 6693 | 6506 | 89 | | 32214235 | |
| HCL_GSE134355_AdultAdrenalGland3 | Normal | 1 | 15083 | None | Normal | Microwell-seq | 6465 | 6257 | 104 | | 32214235 | |
| HCL_GSE134355_AdultArtery1 | Normal | 1 | 9652 | None | Normal | Microwell-seq | 8276 | 8037 | 96 | | 32214235 | |
| HCL_GSE134355_AdultAscendingColon1 | Normal | 1 | 2026 | None | Normal | Microwell-seq | 4396 | 4202 | 64 | | 32214235 | |
| HCL_GSE134355_AdultBladder1 | Normal | 1 | 1267 | None | Normal | Microwell-seq | 5501 | 5292 | 84 | | 32214235 | |
| HCL_GSE134355_AdultBladder2 | Normal | 1 | 2750 | None | Normal | Microwell-seq | 6798 | 6607 | 70 | | 32214235 | |
| HCL_GSE134355_AdultBoneMarrow1 | Normal | 1 | 2261 | None | Normal | Microwell-seq | 5115 | 4937 | 72 | | 32214235 | |
| HCL_GSE134355_AdultBoneMarrow2 | Normal | 1 | 6443 | None | Normal | Microwell-seq | 7295 | 7062 | 97 | | 32214235 | |
| HCL_GSE134355_AdultCerebellum1 | Normal | 1 | 7324 | None | Normal | Microwell-seq | 8995 | 8717 | 157 | | 32214235 | |
| HCL_GSE134355_AdultCervix1 | Normal | 1 | 8096 | None | Normal | Microwell-seq | 6871 | 6652 | 73 | | 32214235 | |
| HCL_GSE134355_AdultDuodenum1 | Normal | 1 | 4681 | None | Normal | Microwell-seq | 5200 | 5018 | 62 | | 32214235 | |
| HCL_GSE134355_AdultEpityphlon1 | Normal | 1 | 4486 | None | Normal | Microwell-seq | 5030 | 4806 | 70 | | 32214235 | |
| HCL_GSE134355_AdultEsophagus1 | Normal | 1 | 2696 | None | Normal | Microwell-seq | 4872 | 4691 | 71 | | 32214235 | |
| HCL_GSE134355_AdultEsophagus2 | Normal | 1 | 8668 | None | Normal | Microwell-seq | 8382 | 8162 | 98 | | 32214235 | |
| HCL_GSE134355_AdultFallopiantube1 | Normal | 1 | 6556 | None | Normal | Microwell-seq | 6548 | 6282 | 109 | | 32214235 | |
| HCL_GSE134355_AdultGallbladder1 | Normal | 1 | 9769 | None | Normal | Microwell-seq | 6986 | 6738 | 120 | | 32214235 | |
| HCL_GSE134355_AdultGallbladder2 | Normal | 1 | 5031 | None | Normal | Microwell-seq | 6129 | 5949 | 75 | | 32214235 | |
| HCL_GSE134355_AdultHeart1 | Normal | 1 | 1308 | None | Normal | Microwell-seq | 6489 | 6295 | 75 | | 32214235 | |
| HCL_GSE134355_AdultHeart2 | Normal | 1 | 1478 | None | Normal | Microwell-seq | 7194 | 6996 | 87 | | 32214235 | |
| HCL_GSE134355_AdultIleum2 | Normal | 1 | 3367 | None | Normal | Microwell-seq | 6710 | 6454 | 85 | | 32214235 | |
| HCL_GSE134355_AdultJejunum2 | Normal | 1 | 5549 | None | Normal | Microwell-seq | 7128 | 6929 | 73 | | 32214235 | |
| HCL_GSE134355_AdultKidney2 | Normal | 1 | 9153 | None | Normal | Microwell-seq | 7908 | 7591 | 144 | | 32214235 | |
| HCL_GSE134355_AdultKidney3 | Normal | 1 | 9966 | None | Normal | Microwell-seq | 9595 | 9259 | 159 | | 32214235 | |
| HCL_GSE134355_AdultKidney4 | Normal | 1 | 3849 | None | Normal | Microwell-seq | 8208 | 7966 | 125 | | 32214235 | |
| HCL_GSE134355_AdultLiver1 | Normal | 1 | 1811 | None | Normal | Microwell-seq | 5576 | 5399 | 58 | | 32214235 | |
| HCL_GSE134355_AdultLiver2 | Normal | 1 | 4377 | None | Normal | Microwell-seq | 6030 | 5783 | 70 | | 32214235 | |
| HCL_GSE134355_AdultLiver4 | Normal | 1 | 4384 | None | Normal | Microwell-seq | 5613 | 5370 | 72 | | 32214235 | |
| HCL_GSE134355_AdultLung1 | Normal | 1 | 8426 | None | Normal | Microwell-seq | 8195 | 8021 | 83 | | 32214235 | |
| HCL_GSE134355_AdultLung2 | Normal | 1 | 6022 | None | Normal | Microwell-seq | 7850 | 7695 | 75 | | 32214235 | |
| HCL_GSE134355_AdultLung3 | Normal | 1 | 9603 | None | Normal | Microwell-seq | 8343 | 8112 | 85 | | 32214235 | |
| HCL_GSE134355_AdultMuscle1 | Normal | 1 | 7775 | None | Normal | Microwell-seq | 7240 | 7075 | 64 | | 32214235 | |
| HCL_GSE134355_AdultOmentum1 | Normal | 1 | 1487 | None | Normal | Microwell-seq | 6308 | 6105 | 83 | | 32214235 | |
| HCL_GSE134355_AdultOmentum2 | Normal | 1 | 9971 | None | Normal | Microwell-seq | 7071 | 6822 | 112 | | 32214235 | |
| HCL_GSE134355_AdultOmentum3 | Normal | 1 | 1354 | None | Normal | Microwell-seq | 5181 | 5012 | 65 | | 32214235 | |
| HCL_GSE134355_AdultPancreas1 | Normal | 1 | 9727 | None | Normal | Microwell-seq | 4817 | 4719 | 44 | | 32214235 | |
| HCL_GSE134355_AdultPeripheralBlood1 | Normal | 1 | 2719 | None | Normal | Microwell-seq | 6471 | 6216 | 106 | | 32214235 | |
| HCL_GSE134355_AdultPeripheralBlood2 | Normal | 1 | 5296 | None | Normal | Microwell-seq | 4853 | 4582 | 69 | | 32214235 | |
| HCL_GSE134355_AdultPeripheralBlood3 | Normal | 1 | 2156 | None | Normal | Microwell-seq | 5574 | 5368 | 67 | | 32214235 | |
| HCL_GSE134355_AdultPeripheralBlood4 | Normal | 1 | 7160 | None | Normal | Microwell-seq | 5464 | 5259 | 71 | | 32214235 | |
| HCL_GSE134355_AdultPleura1 | Normal | 1 | 19695 | None | Normal | Microwell-seq | 8683 | 8439 | 120 | | 32214235 | |
| HCL_GSE134355_AdultProstate1 | Normal | 1 | 2445 | None | Normal | Microwell-seq | 6106 | 5884 | 118 | | 32214235 | |
| HCL_GSE134355_AdultRectum1 | Normal | 1 | 5718 | None | Normal | Microwell-seq | 5702 | 5548 | 71 | | 32214235 | |
| HCL_GSE134355_AdultSigmoidColon1 | Normal | 1 | 3281 | None | Normal | Microwell-seq | 5683 | 5541 | 65 | | 32214235 | |
| HCL_GSE134355_AdultSpleen1 | Normal | 1 | 15806 | None | Normal | Microwell-seq | 6149 | 5848 | 88 | | 32214235 | |
| HCL_GSE134355_AdultStomach1 | Normal | 1 | 1879 | None | Normal | Microwell-seq | 7240 | 6997 | 83 | | 32214235 | |
| HCL_GSE134355_AdultStomach2 | Normal | 1 | 4669 | None | Normal | Microwell-seq | 5097 | 4868 | 66 | | 32214235 | |
| HCL_GSE134355_AdultStomach3 | Normal | 1 | 8076 | None | Normal | Microwell-seq | 7306 | 7112 | 91 | | 32214235 | |
| HCL_GSE134355_AdultTemporalLobe1 | Normal | 1 | 9544 | None | Normal | Microwell-seq | 8233 | 8005 | 127 | | 32214235 | |
| HCL_GSE134355_AdultThyroid1 | Normal | 1 | 6319 | None | Normal | Microwell-seq | 7981 | 7623 | 151 | | 32214235 | |
| HCL_GSE134355_AdultThyroid2 | Normal | 1 | 6328 | None | Normal | Microwell-seq | 7275 | 6985 | 102 | | 32214235 | |
| HCL_GSE134355_AdultTrachea2 | Normal | 1 | 9949 | None | Normal | Microwell-seq | 8785 | 8560 | 97 | | 32214235 | |
| HCL_GSE134355_AdultTransverseColon1 | Normal | 1 | 5765 | None | Normal | Microwell-seq | 7389 | 7117 | 82 | | 32214235 | |
| HCL_GSE134355_AdultTransverseColon2 | Normal | 1 | 11229 | None | Normal | Microwell-seq | 6419 | 6213 | 65 | | 32214235 | |
| HCL_GSE134355_AdultUreter1 | Normal | 1 | 2390 | None | Normal | Microwell-seq | 4366 | 4162 | 65 | | 32214235 | |
| HCL_GSE134355_AdultUterus1 | Normal | 1 | 7694 | None | Normal | Microwell-seq | 6408 | 6235 | 65 | | 32214235 | |
| HCL_GSE134355_ChorionicVillus1 | Normal | 1 | 9898 | None | Normal | Microwell-seq | 7982 | 7793 | 73 | | 32214235 | |
| HCL_GSE134355_CordBlood1 | Normal | 1 | 2150 | None | Normal | Microwell-seq | 4951 | 4772 | 68 | | 32214235 | |
| HCL_GSE134355_CordBlood2 | Normal | 1 | 4444 | None | Normal | Microwell-seq | 4997 | 4806 | 65 | | 32214235 | |
| HCL_GSE134355_CordBloodCD34P1 | Normal | 1 | 5607 | None | Normal | Microwell-seq | 4231 | 4012 | 90 | | 32214235 | |
| HCL_GSE134355_CordBloodCD34P2 | Normal | 1 | 11297 | None | Normal | Microwell-seq | 5239 | 5020 | 92 | | 32214235 | |
| HCL_GSE134355_FetalAdrenalGland2 | Normal | 1 | 9875 | None | Normal | Microwell-seq | 9511 | 9199 | 126 | | 32214235 | |
| HCL_GSE134355_FetalAdrenalGland3 | Normal | 1 | 2547 | None | Normal | Microwell-seq | 5841 | 5672 | 80 | | 32214235 | |
| HCL_GSE134355_FetalAdrenalGland4 | Normal | 1 | 1994 | None | Normal | Microwell-seq | 6286 | 6069 | 94 | | 32214235 | |
| HCL_GSE134355_FetalBrain3 | Normal | 1 | 2904 | None | Normal | Microwell-seq | 6488 | 6246 | 98 | | 32214235 | |
| HCL_GSE134355_FetalBrain4 | Normal | 1 | 3920 | None | Normal | Microwell-seq | 6300 | 6082 | 115 | | 32214235 | |
| HCL_GSE134355_FetalBrain5 | Normal | 1 | 5096 | None | Normal | Microwell-seq | 6962 | 6695 | 110 | | 32214235 | |
| HCL_GSE134355_FetalBrain6 | Normal | 1 | 1705 | None | Normal | Microwell-seq | 6587 | 6346 | 100 | | 32214235 | |
| HCL_GSE134355_FetalCalvaria1 | Normal | 1 | 5129 | None | Normal | Microwell-seq | 5481 | 5264 | 84 | | 32214235 | |
| HCL_GSE134355_FetalEyes1 | Normal | 1 | 1880 | None | Normal | Microwell-seq | 6056 | 5843 | 91 | | 32214235 | |
| HCL_GSE134355_FetalFemaleGonad1 | Normal | 1 | 2710 | None | Normal | Microwell-seq | 7189 | 6970 | 112 | | 32214235 | |
| HCL_GSE134355_FetalFemaleGonad2 | Normal | 1 | 4231 | None | Normal | Microwell-seq | 7751 | 7529 | 104 | | 32214235 | |
| HCL_GSE134355_FetalHeart1 | Normal | 1 | 5319 | None | Normal | Microwell-seq | 6788 | 6613 | 85 | | 32214235 | |
| HCL_GSE134355_FetalHeart2 | Normal | 1 | 2678 | None | Normal | Microwell-seq | 7959 | 7690 | 97 | | 32214235 | |
| HCL_GSE134355_FetalIntestine1 | Normal | 1 | 1448 | None | Normal | Microwell-seq | 7964 | 7614 | 115 | | 32214235 | |
| HCL_GSE134355_FetalIntestine2 | Normal | 1 | 1338 | None | Normal | Microwell-seq | 6180 | 5857 | 81 | | 32214235 | |
| HCL_GSE134355_FetalIntestine3 | Normal | 1 | 9740 | None | Normal | Microwell-seq | 7118 | 6895 | 96 | | 32214235 | |
| HCL_GSE134355_FetalIntestine4 | Normal | 1 | 6931 | None | Normal | Microwell-seq | 6089 | 5898 | 81 | | 32214235 | |
| HCL_GSE134355_FetalIntestine5 | Normal | 1 | 4059 | None | Normal | Microwell-seq | 6897 | 6680 | 96 | | 32214235 | |
| HCL_GSE134355_FetalKidney3 | Normal | 1 | 4939 | None | Normal | Microwell-seq | 7590 | 7343 | 114 | | 32214235 | |
| HCL_GSE134355_FetalKidney4 | Normal | 1 | 4734 | None | Normal | Microwell-seq | 6925 | 6694 | 109 | | 32214235 | |
| HCL_GSE134355_FetalKidney5 | Normal | 1 | 9932 | None | Normal | Microwell-seq | 7588 | 7356 | 129 | | 32214235 | |
| HCL_GSE134355_FetalKidney6 | Normal | 1 | 3057 | None | Normal | Microwell-seq | 6450 | 6236 | 94 | | 32214235 | |
| HCL_GSE134355_FetalLiver1 | Normal | 1 | 17929 | None | Normal | Microwell-seq | 6155 | 5933 | 97 | | 32214235 | |
| HCL_GSE134355_FetalLung1 | Normal | 1 | 4526 | None | Normal | Microwell-seq | 8002 | 7585 | 119 | | 32214235 | |
| HCL_GSE134355_FetalLung2 | Normal | 1 | 5121 | None | Normal | Microwell-seq | 7021 | 6797 | 100 | | 32214235 | |
| HCL_GSE134355_FetalMaleGonad1 | Normal | 1 | 3358 | None | Normal | Microwell-seq | 10162 | 9888 | 149 | | 32214235 | |
| HCL_GSE134355_FetalMaleGonad2 | Normal | 1 | 9853 | None | Normal | Microwell-seq | 9025 | 8764 | 144 | | 32214235 | |
| HCL_GSE134355_FetalMuscle1 | Normal | 1 | 18345 | None | Normal | Microwell-seq | 7160 | 6957 | 85 | | 32214235 | |
| HCL_GSE134355_FetalPancreas1 | Normal | 1 | 8977 | None | Normal | Microwell-seq | 5593 | 5388 | 96 | | 32214235 | |
| HCL_GSE134355_FetalPancreas2 | Normal | 1 | 6939 | None | Normal | Microwell-seq | 9319 | 9060 | 118 | | 32214235 | |
| HCL_GSE134355_FetalPancreas3 | Normal | 1 | 2830 | None | Normal | Microwell-seq | 7037 | 6820 | 90 | | 32214235 | |
| HCL_GSE134355_FetalRib2 | Normal | 1 | 1432 | None | Normal | Microwell-seq | 5151 | 4839 | 74 | | 32214235 | |
| HCL_GSE134355_FetalRib3 | Normal | 1 | 4560 | None | Normal | Microwell-seq | 5348 | 5100 | 78 | | 32214235 | |
| HCL_GSE134355_FetalSkin2 | Normal | 1 | 5294 | None | Normal | Microwell-seq | 6756 | 6553 | 84 | | 32214235 | |
| HCL_GSE134355_FetalSkin3 | Normal | 1 | 1697 | None | Normal | Microwell-seq | 5848 | 5614 | 86 | | 32214235 | |
| HCL_GSE134355_FetalSpinalCord1 | Normal | 1 | 5916 | None | Normal | Microwell-seq | 5463 | 5280 | 75 | | 32214235 | |
| HCL_GSE134355_FetalStomach1 | Normal | 1 | 1322 | None | Normal | Microwell-seq | 6035 | 5792 | 87 | | 32214235 | |
| HCL_GSE134355_FetalStomach2 | Normal | 1 | 6631 | None | Normal | Microwell-seq | 6830 | 6596 | 95 | | 32214235 | |
| HCL_GSE134355_FetalThymus1 | Normal | 1 | 2448 | None | Normal | Microwell-seq | 4827 | 4523 | 105 | | 32214235 | |
| HCL_GSE134355_FetalThymus2 | Normal | 1 | 2068 | None | Normal | Microwell-seq | 4467 | 4170 | 112 | | 32214235 | |
| HCL_GSE134355_hESC1 | Normal | 1 | 1660 | None | Normal | Microwell-seq | 6386 | 6118 | 96 | | 32214235 | |
| HCL_GSE134355_NeonatalAdrenalGland1 | Normal | 1 | 5863 | None | Normal | Microwell-seq | 7563 | 7331 | 111 | | 32214235 | |
| HCL_GSE134355_Placenta1 | Normal | 1 | 9595 | None | Normal | Microwell-seq | 7758 | 7549 | 99 | | 32214235 | |
| NSCLC_EMTAB6149 | Non-small Cell Lung Cancer | 5 | 40218 | None | Primary | 10x Genomics | 18922 | 15628 | 2608 | | 29988129 | |
| NSCLC_GSE117570 | Non-small Cell Lung Cancer | 4 | 11453 | None | Primary | 10x Genomics | 10147 | 9366 | 145 | | 31033233 | |
| NSCLC_GSE127465 | Non-small Cell Lung Cancer | 7 | 31179 | None | Primary | Smart-seq2 | 31797 | 18256 | 9844 | | 30979687 | |
| NSCLC_GSE127471 | Non-small Cell Lung Cancer | 1 | 1108 | None | Primary | 10x Genomics | 10700 | 9478 | 170 | | 31061481 | |
| NSCLC_GSE143423 | Non-small Cell Lung Cancer | 3 | 12193 | None | Metastatic | 10x Genomics | 13375 | 11899 | 338 | | 10.1101/2019.12.30.890517 | |
| NSCLC_GSE99254 | Non-small Cell Lung Cancer | 14 | 12344 | None | Primary | Smart-seq2 | 18885 | 16718 | 879 | | 29942094 | |
| OV_GSE115007 | Ovarian Serous Cystadenocarcinoma | 1 | 6000 | None | Primary | 10x Genomics | 14662 | 12063 | 550 | | 29967419 | |
| OV_GSE118828 | Ovarian Serous Cystadenocarcinoma | 9 | 1909 | None | Primary, Metastatic | Smart-seq2 | 14177 | 13432 | 332 | | 30383866 | |
| PAAD_GSE112845 | Pancreastic Adenocarcinoma | X | 8321 | None | X | 10x Genomics | 12913 | 12313 | 600 | | 30016977 | |
| PBMC_30K_10X | Peripheral Blood Mononuclear Cell | 1 | 29079 | None | Normal | 10x Genomics | 15195 | 12077 | 473 | | NA | |
| PBMC_8K_10X | Peripheral Blood Mononuclear Cell | 1 | 8488 | None | Normal | 10x Genomics | 15399 | 12330 | 623 | | NA | |
| PDAC_GSE111672 | Pancreastic ductal adenocarcinoma | 3 | 6122 | None | Primary | inDrop | 14376 | 14142 | 6 | | 31932730 | |
| SARC_GSE119352_mouse_aPD1aCTLA4 | Sarcoma | X | 13789 | Immunotherapy | Primary | 10x Genomics | 13391 | 10793 | 17 | | 30343900 | |
| SARC_GSE146221_TC71 | Sarcoma | X | 3673 | None | X | 10x Genomics | 13357 | 12066 | 1291 | | 32290418 | |
| SARC_GSE146221_CHLA9 | Sarcoma | X | 4865 | None | X | 10x Genomics | 13965 | 12214 | 1751 | | 32290418 | |
| SARC_GSE146221_CHLA10 | Sarcoma | X | 4632 | None | X | 10x Genomics | 11504 | 9576 | 1928 | | 32290418 | |
| SCC_GSE123813_aPD1 | Squamous Cell Carcinoma | 4 | 25891 | Immunotherapy | Metastatic | 10x Genomics | 15576 | 12400 | 598 | | 31359002 | |
| SKCM_GSE115978_aPD1 | Skin Cutaneous Melanoma | 31 | 7186 | Immunotherapy | Primary, Metastatic | Smart-seq2 | 19530 | 17622 | 779 | | NA | |
| SKCM_GSE120575_aPD1aCTLA4 | Skin Cutaneous Melanoma | 48 | 16291 | Immunotherapy | Metastatic | Smart-seq2 | 33820 | 17540 | 6970 | | 30388456 | |
| SKCM_GSE123139 | Skin Cutaneous Melanoma | 25 | 35494 | None | Primary, Metastatic | MARS-seq | 23559 | 15012 | 3174 | | 30595452 | |
| SKCM_GSE139249 | Skin Cutaneous Melanoma | 4 | 39884 | None | Metastatic | 10x Genomics | 18302 | 14336 | 3094 | | 31801909 | |
| SKCM_GSE148190 | Skin Cutaneous Melanoma | 3 | 27834 | None | Metastatic | 10x Genomics | 16106 | 12688 | 641 | | 32539073 | |
| SKCM_GSE72056 | Skin Cutaneous Melanoma | 19 | 4645 | None | Metastatic | Smart-seq2 | 19126 | 17333 | 758 | | 27124452 | |
| STAD_GSE134520 | Stomach Adenocarcinoma | 13 | 41554 | None | Primary | 10x Genomics | 19124 | 15522 | 2945 | | 31067475, 33521016 | |
| TNBC | Triple-negative breast cancer | 5 | 24271 | None | Primary | 10x Genomics | 28118 | 17254 | 2020 | | 32790115 | |
| TNBC_GSE148673 | Triple-negative breast cancer | 5 | 8944 | None | Primary | 10x Genomics | 32717 | 19403 | 11816 | | 33462507 | |
| UCEC_GSE139555 | Uterine Corpus Endometrial Carcinoma | 3 | 12758 | None | Primary | 10x Genomics | 14422 | 11733 | 480 | | 32103181 | |