| Bladder_GSE171351 | high-grade muscle invasive bladder cancer | 4 | bladder | 4086 | Primary | Gouin KH 3rd, et al. Nat Commun 2021 | 4 |
| Bone_GSE174313 | normal cranial suture | 4 | bone | 1670 | Normal | Tower RJ, et al. Proc Natl Acad Sci U S A. 2021 | 4 |
| Brain_GSE147747 | normal adult mouse brain | 3 | brain | 34103 | Normal | Ortiz C, et al. Sci Adv 2020 | 75 |
| Brain_GSE158450 | brain development | 1 | brain | 3024 | Normal | Joglekar A,et al. Nat Commun 2021 | 1 |
| Brain_GSE165098 | neuroinflammatory | 6 | brain | 15658 | Normal | Hasel P,et al. Nat Neurosci 2021 | 6 |
| Brain_GSE182127 | heme-exposed brain | 7 | brain | 19066 | Normal | Akeret K,et al. Data Brief 2022 | 7 |
| Brain_GSE185715 | normal mouse brain | 3 | brain | 18359 | Normal | Gracia Villacampa E, et al. Cell Genom 2021 | 7 |
| Brain_PMID33420318 | brain tumor | 2 | brain | 3631 | Primary | Kvastad L, et al. Commun Biol 2021 | 6 |
| Brain_PMID35177622 | glioblastoma | 3 | brain | 2251 | Primary | Ravi VM, et al. Nat Commun 2022 | 3 |
| Brain_PMID35642896 | normal mouse brain | 1 | brain | 2695 | Normal | Hou W, et al. Bioinformatics. 2022 | 1 |
| Brain_PMID36778332 | normal mouse brain | 1 | brain | 3355 | Normal | Jones A, et al. bioRxiv 2023 | 1 |
| Breast_GSE203612 | breast cancer | 3 | breast | 6593 | Primary | Barkley D, et al. Nature Genetics 2022 | 3 |
| Breast_PMID33420318 | breast cancer | 2 | breast | 3035 | Primary | Kvastad L, et al. Commun Biol 2021 | 6 |
| Breast_PMID34493872 | breast cancer | 6 | breast | 15611 | Primary | Wu SZ, et al. Nat Genet 2021 | 6 |
| Breast_PMID34650042 | breast cancer | 8 | breast | 13620 | Primary | Andersson A, et al. Nat Commun 2021 | 36 |
| Breast_PMID34845373 | breast cancer | 1 | breast | 1031 | Primary | Bergenstrahle L, et al. Nat Biotechnol 2022 | 4 |
| Colon_GSE158328 | human intestinal development | 5 | colon | 9330 | Normal | Fawkner-Corbett D,et al. Cell 2021 | 8 |
| Colon_GSE169749 | dextran sodium sulfate induced injury | 2 | colon | 6234 | Primary | Parigi SM,et al. Nat Commun 2022 | 2 |
| Colon_GSE190595 | dextran sodium sulfate induced injury | 2 | colon | 7481 | Normal | Parigi SM,et al. Nat Commun 2022 | 2 |
| Embryo_GSE160137 | mouse embryos development | 4 | embryos | 790 | Normal | Sanchez-Ferras O,et al. Nat Commun 2021 | 4 |
| Endometrium_GSE203612 | endometrial carcinoma | 1 | endometrium | 1351 | Primary | Barkley D, et al. Nature Genetics 2022 | 1 |
| Gastric_GSE186290 | gastric cancer | 1 | gastric | 2429 | Primary | Yamasaki J, et al. Cancer Sci. 2022 | 1 |
| Gastric_GSE203612 | gastric stromal tumor | 2 | gastric | 5117 | Primary | Barkley D, et al. Nature Genetics 2022 | 2 |
| Heart_PMID31835037 | developing heart in early pregnancy | 4 | heart | 3111 | Normal | Asp M, et al. Cell 2019 | 19 |
| Hippocampus_PMID33083725 | Alzheimers disease | 12 | hippocampus | 15062 | Primary | Navarro JF, et al. iScience 2020 | 24 |
| Ileum_PMID34845373 | Colorectal Cancer | 1 | ileum | 13119 | Primary | Bergenstrahle L, et al. Nat Biotechnol 2022 | 4 |
| Intestine_PMID36776149 | ovarian carcinosarcoma (Metastasis to omentum) | 1 | intestine | 16194 | Metastatic | Gracia Villacampa E, et al. Cell Genom 2021 | 4 |
| Kidney_GSE171406_human | acute kidney injury | 1 | kidney | 3007 | Primary | Melo Ferreira R,et al. JCI Insight 2021 | 1 |
| Kidney_GSE171406_mouse | acute kidney injury | 1 | kidney | 5787 | Primary | Melo Ferreira R,et al. JCI Insight 2021 | 3 |
| Kidney_GSE182939 | acute kidney injury | 2 | kidney | 9539 | Primary | Dixon EE,et al. J Am Soc Nephrol 2022 | 5 |
| Kidney_GSE185715 | kidney organoid | 1 | kidney | 1357 | - | Gracia Villacampa E, et al. Cell Genom 2021 | 3 |
| Liver_GSE165141 | normal liver tissue | 8 | liver | 8641 | Normal | Hildebrandt F, et al. Nat Commun 2021 | 12 |
| Liver_GSE185477 | normal human liver caudate lobes | 1 | liver | 2265 | Normal | Andrews TS, et al. Hepatol Commun 2022 | 1 |
| Liver_GSE192741_human | macrophage development | 4 | liver | 6889 | Normal | Guilliams M,et al. Cell 2022 | 5 |
| Liver_GSE192741_mouse | macrophage development | 6 | liver | 17290 | Normal | Guilliams M,et al. Cell 2022 | 10 |
| Liver_GSE203612 | liver hepatocellular carcinoma | 1 | liver | 1661 | Primary | Barkley D, et al. Nature Genetics 2022 | 1 |
| Lung_GSE178361 | normal human lung | 2 | lung | 2220 | Normal | Kadur Lakshminarasimha Murthy P,et al. Nature 2022 | 2 |
| Lung_GSE185715 | lung organoid | 1 | lung | 1832 | - | Gracia Villacampa E, et al. Cell Genom 2021 | 4 |
| Lung_GSE193460 | lung cancer | 3 | lung | 7627 | Primary | Dhainaut M,et al. Cell 2022 | 4 |
| Lung_PMID36776149 | COVID-19 | 1 | lung | 1514 | Primary | Gracia Villacampa E, et al. Cell Genom 2021 | 2 |
| Muscle_PMID36776149 | soft tissue carcinoma | 4 | muscle | 15154 | Primary | Gracia Villacampa E, et al. Cell Genom 2021 | 4 |
| OFB_PMID33083725 | Alzheimers disease | 12 | olfactory bulb | 5059 | Primary | Navarro JF, et al. iScience 2020 | 24 |
| OFB_PMID34845373 | mouse olfactory bulb | 1 | olfactory bulb | 3116 | Normal | Bergenstrahle L, et al. Nat Biotechnol 2022 | 12 |
| Ovary_GSE203612 | ovarian cancer | 2 | ovary | 3423 | Primary | Barkley D, et al. Nature Genetics 2022 | 2 |
| Pancreas_GSE111672 | pancreatic Cancer | 6 | pancreas | 3285 | Primary | Moncada R, et al. Nat Biotechnol 2020 | 10 |
| Pancreas_GSE203612 | pancreatic ductal adenocarcinoma | 1 | pancreas | 1789 | Primary | Barkley D, et al. Nature Genetics 2022 | 1 |
| Prostate_GSE230282 | Prostate cancer | 1 | prostate | 4397 | Primary | Watanabe R, et al. International Journal of Molecular Sciences 202 | 1 |
| Prostate_PMID36778332 | Prostate cancer | 1 | prostate | 4371 | Primary | Jones A, et al. bioRxiv 2023 | 1 |
| Rheumatoidarthritis_PMID31831833 | rheumatoid arthritis | 3 | synovial | 3611 | Primary | Carlberg K, et al. Sci Rep 2019 | 9 |
| Skin_GSE144240 | squamous cell carcinoma | 4 | skin | 8671 | Primary | Andersson A, et al. Nat Commun 2021 | 12 |
| Skin_GSE178758 | skin wounds tissue | 1 | skin | 4428 | Primary | Ma C, et al. Cell Systems 2022 | 4 |
| Skin_PMID34845373 | squamous cell carcinoma | 1 | skin | 10404 | Primary | Bergenstrahle L, et al. Nat Biotechnol 2022 | 4 |
| Spondyloarthritis_PMID31831833 | spondyloarthritis | 3 | synovial | 2628 | Primary | Carlberg K, et al. Sci Rep 2019 | 9 |