Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Breast Cancer

CeRNA1

Foxo3P[Pseudogene]

miRNA

miR-762[miRNA]

CeRNA2

Foxo3[mRNA]


Tissue/Cell line

Mda-Mb-468 And Mda-Mb-231

Specie

Homo sapiens (human)

Citation

Oncogene 2016 Jul 28 35, 3919-31 doi:10.1038/onc.2015.460 PMID:26657152


Reference title
Foxo3 activity promoted by non-coding effects of circular RNA and Foxo3 pseudogene in the inhibition of tumor growth and angiogenesis.
Experimental verification
luciferase reporter assays;qRT-PCR;Western blot assay

Functional description
We found that the transcripts of Foxo3 mRNA, Foxo3P and Foxo3 circular RNA were all targets of miR-22, miR-136*, miR-138, miR-149*, miR-433, miR-762, miR-3614–5p and miR-3622b–5p. Together, these mechanisms effectively promoted the translation of the Foxo3 mRNA.

Annotations

External Annotation for Foxo3P
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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