Basic Information
Regular Relationship :
Tissue/Cell lineHuh-7,Hek293, Hela And A549
SpecieBovine viral diarrhea virus 1(BVDV)
CitationCell Host Microbe 2016 Mar 9 19, 409-23 doi:10.1016/j.chom.2016.02.007 PMID:26962949
Reference title
A broad RNA virus survey reveals both miRNA dependence and functional sequestration
Experimental verification
luciferase reporter assays
Functional description
For BVDV, around 40% of miR-17 interactions mapped to the virus, suggesting an analogous sponge effect.Along these lines, we reasoned that the BVDV miR-17 sponge effect should result in specific de-repression of cellular miR-17 targets, measurable by mRNA-seq.
Annotations
External Annotation for BVDV |
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LncRNA-associated competing triplets and functions. |
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Comprehensive experimentally supported associations between lncRNA and human cancer. |
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Infer genomic variations that disturb lncRNA-associated ceRNA regulation.. |
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Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements. |
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Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data. |
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Information on all annotated and predicted human genes. |
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Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information). |
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Genome browser for vertebrate genomes. |
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An annotated collection of all publicly available DNA sequences. |
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A wiki-based platform for community curation of human long non-coding RNAs. |
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An integrated knowledge database dedicated to non-coding RNAs. |
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An integrated database of human annotated lncRNA transcripts. |
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Comprehensive annotations of eukaryotic long non-coding RNAs. |
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Comprehensive experimentally supported associations between lncRNA and human cancer. |
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A comprehensive, authoritative compendium of human genes and genetic phenotypes. |
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The catalogue of somatic mutations in cancer. |
