Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Osteosarcoma

CeRNA1

TUG1[LncRNA]

miRNA

miR-132-3p[miRNA]

CeRNA2

SOX4[mRNA]


Tissue/Cell line

U2Os, Mg-63, Saos-2, And 143B And The Human Normal Osteoblastic Cell Line

Specie

Homo sapiens (human)

Citation

Yonsei Med J 2018 Mar 59, 226-235 doi:10.3349/ymj.2018.59.2.226 PMID:29436190


Reference title
Long Non-Coding RNA TUG1 Promotes Proliferation and Inhibits Apoptosis of Osteosarcoma Cells by Sponging miR-132-3p and Upregulating SOX4 Expression.
Experimental verification
RT-qPCR, Western blot, Luciferase reporter assay, in vitro knockdown

Functional description
TUG1 was highly expressed in human OS tissues,OS cell lines,and primary OS cells.TUG1 knockdown hindered proliferation and induced apoptosis in human OS cell lines and primary OS cells.Moreover, TUG1 inhibited miR-132-3p expression by direct interaction,and introduction of miR-132-3p inhibitor partly abrogated the effect of TUG1 knockdown on the proliferation and apoptosis of OS cells.Furthermore, SOX4 was validated as a target of miR-132-3p.Further functional analyses revealed that miR-132-3p inhibited proliferation and induced apoptosis of OS cells, while this effect was greatly abated following SOX4 overexpression.Moreover, TUG1 knockdown suppressed proliferation and promoted apoptosis by upregulating miR-132-3p and downregulating SOX4 in primary OS cells.

Annotations

External Annotation for TUG1
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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