Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Bladder Cancer

CeRNA1

TUG1[LncRNA]

miRNA

miR-29c[miRNA]

CeRNA2

NA[mRNA]


Tissue/Cell line

Control And Bc Cell Lines

Specie

Homo sapiens (human)

Citation

Oncol Res 2018 Aug 23 26, 1083-1091 doi:10.3727/096504018x15152085755247 PMID:29321088


Reference title
Upregulation of long non-coding RNA TUG1 promotes bladder cancer cell 5 proliferation, migration and invasion by inhibiting miR-29c.
Experimental verification
qRT-PCR,Luciferase reporter assay,in vitro knockdown

Functional description
TUG1 was upregulated and microRNA-29c(miR-29c) was downregulated in BC tissues and cell lines.Furthermore, TUG1 knockdown markedly increased the expression of miR-29c in vitro.On the contrary, overexpression of TUG1 remarkably decreased the expression of miR-29c.Transfection with plasmids containing mutant TUG1 has no effect on the expression of miR-29c. There were direct interactions between miR-29c and the binding sites of TUG1.In addition,the inhibitory effects of small interfering RNA specific for TUG1 on BC cell proliferation,migration and invasion were reversed by downregulation of miR-29c.

Annotations

External Annotation for TUG1
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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