Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Bladder Cancer

CeRNA1

ZFAS1[LncRNA]

miRNA

miR-329[miRNA]

CeRNA2

NA[mRNA]


Tissue/Cell line

T24, Rt4, 5637, Sw780, Se780 And Um-Uc-3

Specie

Homo sapiens (human)

Citation

Biomed Pharmacother 2018 Jul 103, 174-181 doi:10.1016/j.biopha.2018.04.031 PMID:29653362


Reference title
The long noncoding RNA ZFAS1 facilitates bladder cancer tumorigenesis by sponging miR-329.
Experimental verification
qPCR,Luciferase reporter assay etc

Functional description
ZFAS1 expression was significantly upregulated in bladder cancer tissues and cell lines.Furthermore, Kaplan-Meier analysis revealed that high ZFAS1 expression was significantly associated with unfavorable progression free survival (PFS) and overall survival(OS) of bladder cancer patients.Moreover, silencing of ZFAS1 expression could markedly suppress bladder cancer cells proliferation and colony formation, arrest cell cycle, promote cell apoptosis and inhibit cell migration in vitro. In addition, bioinformatics analysis, luciferase reporter assay,and pull down assay revealed that ZFAS1 straightly interacted with miR-329.Lastly, rescue experiments confirmed that miR-329 inhibitor reversed the tumor suppressing roles of ZFAS1 knockdown on bladder cancer cells.Collectively, our results illuminated that ZFAS1 could serve as an oncogene in the tumorigenesis of bladder cancer,and discovered the functional regulatory network of ZFAS1 sponging miR-329.

Annotations

External Annotation for ZFAS1
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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