Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Adaptive Immunity

CeRNA1

AK020764[LncRNA]

miRNA

miR-142-3p[miRNA]

CeRNA2

NA[mRNA]


Tissue/Cell line

Cd8 T Cells

Specie

Mus musculus (mouse)

Citation

J Immunol 2009 Jun 15 182, 7738-48 doi:10.4049/jimmunol.0900603 PMID:19494298


Reference title
Genome-wide identification of long noncoding RNAs in CD8+ T cells.
Experimental verification
qRT-PCR

Functional description
Two miRNAs, mir-142-5p and mir-142-3p, recently shown to be among the most highly expressed miRNAs in naive, memory, and effector CD8 T cell populations (76), are hosted within the first intron of a long ncRNA (AK020764) that is also strongly expressed in CD8 T cells.

Annotations

External Annotation for AK020764
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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