Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Liver Cancer

CeRNA1

HULC[LncRNA]

miRNA

miR-372[miRNA]

CeRNA2

CREB[mRNA]


Tissue/Cell line

Creb, Hulc, Prkacb Etc.

Specie

Homo sapiens (human)

Citation

Nucleic Acids Res 2010 Sep 38, 5366-83 doi:10.1093/nar/gkq285 PMID:20423907


Reference title
CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer.
Experimental verification
qPCR, Western blot, Luciferase reporter assay etc.

Functional description
The study elucidates that fine tuning of HULC expression is part of an auto-regulatory loop in which it's inhibitory to expression and activity of miR-372 allows lncRNA up-regulated expression in liver cancer.

Annotations

External Annotation for HULC
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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