Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Heart Failure

CeRNA1

CASC7[LncRNA]

miRNA

miR-30c[miRNA]

CeRNA2

IL-11[mRNA]


Tissue/Cell line

H9C2 cells

Specie

Homo sapiens (human)

Citation

J Cell Mol Med 2020 Oct 24, 11500-11511 doi:10.1111/jcmm.15764 PMID:32860492


Reference title
Long non-coding RNA CASC7 is associated with the pathogenesis of heart failure via modulating the expression of miR-30c.
Experimental verification
RT-PCR,Luciferase reporter assay,Western blot etc

Functional description
In summary, the expression of CASC7 was high while the expres-sion of miR-30c was low in plasma and peripheral blood monocytes collected from HF patients. Furthermore, miR-30c can be used as a diagnostic biomarker of HF, while CASC7 is a competing endog-enous RNA of miR-30c. CASC7 can indirectly regulate IL-11 expres-sion via miR-30. The results of this study provided a new perspective for lncRNA-directed diagnosis and treatment of HF.

Annotations

External Annotation for CASC7
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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