Basic Information
Regular Relationship :
Phenotype/DiseaseSpecieHepatocellular Carcinoma
CeRNA1HNF1A-AS1[LncRNA]
miRNAmiR-30b-5p[miRNA]
CeRNA2ATG5[mRNA]
Tissue/Cell lineHCC cell lines HepG2, SMMC-7721, PLC/PRF/5, Huh7 and normal liver cell line HL-7702
SpecieHomo sapiens (human)
CitationBiochem Biophys Res Commun 2016 May 13 473, 1268-1275 doi:10.1016/j.bbrc.2016.04.054 PMID:27084450
Reference title
Long non-coding RNA HNF1A-AS1 functioned as an oncogene and autophagy promoter in hepatocellular carcinoma through sponging hsa-miR-30b-5p
Experimental verification
qRT-PCR,Western blot,RIP etc.
Functional description
In our research, wefirst explored the expressionlevels and clinicopathological significance of HNF1A-AS1 in HCC.Then in vitro experiments revealed its roles in various biologicalbehaviors. Furthermore, we deemed HNF1A-AS1 as a ceRNA anddeeply probed its regulating mechanisms.
Annotations
External Annotation for HNF1A-AS1 |
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LncRNA-associated competing triplets and functions. |
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Comprehensive experimentally supported associations between lncRNA and human cancer. |
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Infer genomic variations that disturb lncRNA-associated ceRNA regulation.. |
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Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements. |
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Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data. |
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Information on all annotated and predicted human genes. |
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Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information). |
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Genome browser for vertebrate genomes. |
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An annotated collection of all publicly available DNA sequences. |
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A wiki-based platform for community curation of human long non-coding RNAs. |
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An integrated knowledge database dedicated to non-coding RNAs. |
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An integrated database of human annotated lncRNA transcripts. |
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Comprehensive annotations of eukaryotic long non-coding RNAs. |
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Comprehensive experimentally supported associations between lncRNA and human cancer. |
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A comprehensive, authoritative compendium of human genes and genetic phenotypes. |
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The catalogue of somatic mutations in cancer. |
