Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Mycoplasma Pneumoniae Pneumonia

CeRNA1

GAS5[LncRNA]

miRNA

miR-222-3p[miRNA]

CeRNA2

TIMP3[mRNA]


Tissue/Cell line

MPP cells

Specie

Homo sapiens (human)

Citation

Mol Med Rep. 2021 May;23(5):380. doi: 10.3892/mmr.2021.12019. Epub 2021 Mar 24.


Reference title
Long non-coding RNA GAS5 protects against Mycoplasma pneumoniae pneumonia by regulating the microRNA-222-3p/TIMP3 axis.
Experimental verification
Dual-luciferase reporter assay;ELISA;MTT assay;Luciferase reporter assay;MTT assay;

Functional description
Mycoplasma pneumoniae pneumonia (MPP) is a type of pneumonia induced by M. pneumoniae (MP) infection. The present study investigated the effect of long non-coding RNA growth arrest-specific 5 (GAS5) in MPP and the underlying molecular mechanism of this. The expression of GAS5, microRNA-222-3p, (miR-222-3p) and tissue inhibitor of metalloproteinases-3 (TIMP3) in MPP was investigated using reverse transcription-quantitative PCR. Lipid-associated membrane protein (LAMP)-induced THP-1 cells were used to model MPP. The viability of LAMP-induced THP-1 cells was analyzed using an MTT assay. Expression levels of interleukin (IL)-1β, IL-6 and tumor necrosis factor-α (TNF-α) pro-inflammatory cytokines, and the anti-inflammatory cytokine heme oxygenase-1 (HO-1) in LAMP-induced THP-1 cells were measured by ELISA. A dual-luciferase reporter assay assessed the associations among GAS5, miR-222-3p and TIMP3. The expression of GAS5 and TIMP3 was downregulated in MPP. Expression of miR-222-3p was upregulated. GAS5-overexpression increased the viability of LAMP-induced THP-1 cells. GAS5 upregulation decreased the levels of IL-1β, IL-6, TNF-α and HO-1 levels in LAMP-induced THP-1 cells. GAS5 directly interacted with miR-222-3p. TIMP3 was a target of miR-222-3p. miR-222-3p upregulation or TIMP3-knockdown reversed the promotion effect on cell viability as well as the inhibitory effect on inflammation caused by GAS5-overexpression in LAMP-induced THP-1 cells. GAS5-overexpression increased the viability and decreased the inflammation of LAMP-induced THP-1 cells by regulating the miR-222-3p/TIMP3 axis. These results demonstrated a potential therapeutic target for MPP treatment.

Annotations

External Annotation for GAS5
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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