Detail (Experimental CeRNA)

Home Detail(Experimental CeRNA)

Basic Information

Regular Relationship :


Phenotype/DiseaseSpecie

Thyroid Cancer

CeRNA1

HOTAIRM1[LncRNA]

miRNA

miR-148a[miRNA]

CeRNA2

Wnt10b[mRNA]


Tissue/Cell line

BCPAP cells

Specie

Homo sapiens (human)

Citation

Oncol Rep. 2021 Mar;45(3):1083-1093. doi: 10.3892/or.2020.7919. Epub 2020 Dec 31.


Reference title
lncRNA HOTAIRM1 regulates cell proliferation and the metastasis of thyroid cancer by targeting Wnt10b.
Experimental verification
MTT assay;qPCR;RT-qPCR;Western blot;luciferase assay;MTT assay;

Functional description
Long non-coding RNAs play a role in a variety of malignancies, such as thyroid cancer (TC). However, the effects and function of lincRNA HOTAIRM1 (LINC HOTAIRM1) in TC remains obscure. In the present study, the expression of HOTAIRM1 was evaluated in TC tissues and cells by RT-qPCR and the association between the lncRNA and disease progression was assessed. In vitro, the biological function of HOTAIRM1 was assessed in TC. Moreover, changes in the expression of Wnt10b were measured by western blot analysis. In addition, MTT assay, bioinformatics analysis and luciferase assays were performed to determine the target binding effect between LINC HOTAIRM1 and miR-148a, as well as that between Wnt10b and miR-148a. The changes in the metastatic ability of TPC-1 and BCPAP cells were evaluated by Transwell assay. The pronounced upregulated expression of HOTAIRM1 was evident in TC cells and tissues, and was associated with TNM stage and lymph node metastasis. When HOTAIRM1 was knocked down, this inhibited the proliferative and invasive abilities of TPC-1 and BCPAP cells in vitro. The knockdown of this lncRNA also increased the expression of microRNA-148a (miR-148a) and decreased Wnt10b expression in these cells, whereas transfection with miR-148a inhibitor was sufficient to overcome this Wnt10b downregulation. In line with these results, the overexpression of miR-148a markedly suppressed Wnt10b expression, whereas miR-148a inhibition resulted in the opposite effects. The overexpression of Wnt10b was also sufficient to overcome the effects of miR-148a mimics on TPC-1 and BCPAP cells. Taken together, these results suggest that miR-148a and Wnt10b are downstream effectors of the HOTAIRM1 signaling pathway in TC. This HOTAIRM1/miR-148a/Wnt10 axis may thus be amenable to therapeutic targeting in order to improve disease outcomes in patients with TC.

Annotations

External Annotation for HOTAIRM1
LncRNA-associated competing triplets and functions.
Comprehensive experimentally supported associations between lncRNA and human cancer.
Infer genomic variations that disturb lncRNA-associated ceRNA regulation..
Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements.
Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data.
Information on all annotated and predicted human genes.
Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information).
Genome browser for vertebrate genomes.
An annotated collection of all publicly available DNA sequences.
A wiki-based platform for community curation of human long non-coding RNAs.
An integrated knowledge database dedicated to non-coding RNAs.
An integrated database of human annotated lncRNA transcripts.
Comprehensive annotations of eukaryotic long non-coding RNAs.
Comprehensive experimentally supported associations between lncRNA and human cancer.
A comprehensive, authoritative compendium of human genes and genetic phenotypes.
The catalogue of somatic mutations in cancer.

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