Basic Information
Regular Relationship :
Phenotype/DiseaseSpecieColorectal Cancer
CeRNA1LNC474[LncRNA]
miRNAmiR-15b[miRNA]
CeRNA2APAF2[mRNA]
Tissue/Cell lineHCT116, SW480, RKO, Caco-2, LOVO, HT30
SpecieHomo sapiens (human)
CitationCardiovasc Pathol 2020 Nov-Dec 49, 107263 doi:10.1016/j.carpath.2020.107263 PMID:32784110
Reference title
LNC473 Regulating APAF1 IRES-Dependent Translation via Competitive Sponging miR574 and miR16b: Implications in Colorectal Cancer
Experimental verification
RT-PCR,qPCR,Luciferase reporter assay,Western blot,RIP
Functional description
Our results uncover a novel LNC473-miR574/miR15b-APAF2 signaling axis, which provides new targets and crosstalk regulation mechanism for CRC prevention and treatment.
Annotations
External Annotation for LNC474 |
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LncRNA-associated competing triplets and functions. |
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Comprehensive experimentally supported associations between lncRNA and human cancer. |
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Infer genomic variations that disturb lncRNA-associated ceRNA regulation.. |
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Provide and annotate disease or phenotype-associated variants in human long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) or their regulatory elements. |
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Providing cellular-specific lncRNA-associated ceRNA networks predicted via high-throughput analysis of single-cell genomic data. |
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Information on all annotated and predicted human genes. |
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Gene nomenclature, gene families and associated resources (genomic, proteomic, phenotypic information). |
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Genome browser for vertebrate genomes. |
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An annotated collection of all publicly available DNA sequences. |
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A wiki-based platform for community curation of human long non-coding RNAs. |
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An integrated knowledge database dedicated to non-coding RNAs. |
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An integrated database of human annotated lncRNA transcripts. |
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Comprehensive annotations of eukaryotic long non-coding RNAs. |
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Comprehensive experimentally supported associations between lncRNA and human cancer. |
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A comprehensive, authoritative compendium of human genes and genetic phenotypes. |
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The catalogue of somatic mutations in cancer. |
