Detailed information
| LncRNA Name | BA318C17.1 |
| Variant Type | copy number variation |
| Variant ID | approximately 190 kb section from 14.85 Mb to 15.04 Mb of chromosome 20 |
| Species | human |
| Circulating | ✕ |
| Survival | ✕ |
| CeRNA | ✕ |
| Methylation | ✕ |
| Enhancer | ✕ |
| Drug | ✕ |
| Disease/Trait | colorectal cancer |
| LncRNA Target Gene | NA |
| Tissue | primary CRC tissues, cell lines (Co1o205, Co1o320 HSR, Co1o678, Co1o741, HCA7, HCA46, HRA19, LS1034 etc.) |
| Experiment | qPCR, STS-PCR, ISH etc. |
| Function Description | Two noncoding RNA genes located in the region, BA318C17.1 and DJ974N19.1, were investigated by mutation analysis and real-time PCR in colorectal cancer cell lines. Sequence changes in BA318C17.1 and reduced expression of both genes was detected, suggesting that the abrogation of these genes may play a role in colorectal tumorigenesis. |
| Pubmed ID | 16110499 |
| Year | 2005 |
| Title | Deletion at chromosome band 20p12.1 in colorectal cancer revealed by high resolution array comparative genomic hybridization. |
| External Links | |
|---|---|
| Links For BA318C17.1 | GeneCards HGNC NONCODE LncRNAWiki lncrnadb |
| Links For colorectal cancer | OMIM Cosmic |
| Links For approximately 190 kb section from 14.85 Mb to 15.04 Mb of chromosome 20 | dbSNP ClinVar OMIM |