LncRNA NameH19
Variant TypeSNP
Variant IDrs217727
Specieshuman
Circulating
Survival
CeRNA
Methylation
Enhancer
Drug
Disease/Traitbladder cancer
LncRNA Target GeneNA
Tissueblood
ExperimentqPCR etc.
Function DescriptionA significantly decreased risk of bladder cancer was found for the rs2839698 TC genotype, but not for CC homozygotes. The rs2839698 TC genotype was especially associated with a reduced risk of developing non-muscle-invasive disease. Borderline significantly decreased risks of bladder cancer were found for the rs2107425 CT genotype, but not for TT homozygotes or for T allele carriers of rs217727. Haplotype analysis did not result in stronger associations with bladder cancer compared with the single-locus analyses. An SNP polymorphism in the nonprotein-encoding H19 gene is associated with a decreased risk of developing nonmuscleinvasive bladder cancer. This association was found for only heterozygotes, not for homozygotes.
Pubmed ID18262338
Year2008
TitlePolymorphisms in the H19 gene and the risk of bladder cancer.
External Links
Links For H19GeneCards HGNC NONCODE LncRNAWiki lncrnadb
Links For bladder cancerOMIM Cosmic
Links For rs217727 dbSNP ClinVar OMIM