LncRNA NameH19
Variant TypeSNP
Variant IDrs217727
Specieshuman
Circulating
Survival
CeRNA
Methylation
Enhancer
Drug
Disease/Traitbreast cancer
LncRNA Target GeneNA
TissueBC patients tissues
ExperimentqPCR etc.
Function DescriptionIn our study, we confirmed that the T variant of rs217727 was consistently associated with an increased risk of BC in the codominant model.Another previous study by Yang et al32 found that the rs217727 CT + TT genotypes were correlated with significantly increased gastric cancer risk (OR 1.32, 95% CI 1.01-1.71), while in functional assay analysis, the rs217727 CT, TT, or CT + TT genotypes were found not to affect H19 mRNA expression levels compared with the CC genotype, suggesting the C/T mutation might potentially change translational efficiency and lead to a transformation in H19 structure, thereby influencing the function of H19.
Pubmed ID28919786
Year2017
TitleGenetic variants in long noncoding RNA H19 contribute to the risk of breast cancer in a southeast China Han population.
External Links
Links For H19GeneCards HGNC NONCODE LncRNAWiki lncrnadb
Links For breast cancerOMIM Cosmic
Links For rs217727 dbSNP ClinVar OMIM