LncRNA NameLINC00152
Variant TypePoint mutations
Variant IDLINC00152 stem-loop(nucleotides 280-401)
Specieshuman
Circulating
Survival
CeRNA
Methylation
Enhancer
Drug
Disease/Traitglioblastoma
LncRNA Target GeneNA
Tissueglioblastoma cell lines (U87)
ExperimentqPCR, Western blot, in vitro knockdown
Function DescriptionIt is determined that LINC00152/CYTOR is upregulated in glioblastoma multiforme (GBM) and aggressive wild-type IDH1/2 grade 2/3 gliomas and upregulation associates with poor patient outcomes. Inhibition of the mostly cytoplasmic LINC00152 decreases, and overexpression increases cellular invasion. LINC00152 knockdown alters the transcription of genes important to epithelial-to-mesenchymal transition (EMT). PARIS and Ribo-seq data, together with secondary structure prediction, identified a protein-bound 121-bp stem-loop structure at the 3' end of LINC00152 whose overexpression is sufficient to increase invasion of GBM cells. Point mutations in the stem-loop suggest that stem formation in the hairpin is essential for LINC00152 function. LINC00152 has a nearly identical homolog, MIR4435-2HG, which encodes a near identical hairpin, is equally expressed in low-grade glioma (LGG) and GBM, predicts poor patient survival in these tumors, and is also reduced by LINC00152 knockdown. Together, these data reveal that LINC00152 and its homolog MIR4435-2HG associate with aggressive tumors and promote cellular invasion through a mechanism that requires the structural integrity of a hairpin structure.
Pubmed ID29991527
Year2018
TitleLINC00152 Promotes Invasion Through a 3'-Hairpin Structure and Associates With Prognosis in Glioblastoma
External Links
Links For LINC00152GeneCards HGNC NONCODE LncRNAWiki lncrnadb
Links For glioblastomaOMIM Cosmic
Links For LINC00152 stem-loop(nucleotides 280-401) dbSNP ClinVar OMIM