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Basic information of NCAN :

Official Symbol of Gene NCAN
Species Homo sapiens
Entrez Gene ID 2465
Official Full Name neurocan
Also known as CSPG3
Gene Type protein coding
dbXrefs Ensembl:ENSG00000130287 MIM:600826; AllianceGenome:HGNC:2465
Map Location 19p13.11
Variation Type SNP
refSNP ID rs1064395

Sample information of multiple sclerosis:

Detected Sample brain
Sample Detail N/A
Detected Method PCR
Disease MS
Disease subtype N/A
Population N/A
Sample Size 179 MS cases

Literature information of multiple sclerosis :

Pubmed ID 31228212
Year 2020
Title Post-mortem multiple sclerosis lesion pathology is influenced by single nucleotide polymorphisms

Results of multiple sclerosis :

Risk Type Disease risk
Main Result Positive
Result Three SNPs linked to MS pathology-associated genes showed a significant association with either proportion of active lesions (rs3130253/MOG), incidence of cortical gray matter lesions (rs1064395/NCAN) or the proportion of remyelinated lesions (rs5742909/CTLA4)
Mechanism/Pathway This is in part because of the difficulty in the functional translation of genotype into disease-relevant mechanisms