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LncRNA List
The correlation between LncRNAs and the infiltration of immune cells across cancer types
Description:
'Immune data source' refers to the source of immune cell infiltration level.
'P value' refers to the significance of the correlated pairs.
'R value' refers to the K-M survival curve of regulons in the corresponding cancer.
'plot' refers to the correlation plots between regulons and the infiltration of immune cells.
| Cancer | LncRNA ID | Symbol | Immune cell | Immune data source | P value | R value | plot |
|---|---|---|---|---|---|---|---|
| ACC | ENSG00000196167 | COLCA1 | Myeloid dendritic cell | QUANTISEQ | 3.581e-04 | -0.3916 | plot |
| ACC | ENSG00000196167 | COLCA1 | cytotoxicity score | MCPCOUNTER | 4.884e-03 | 0.3148 | plot |
| ACC | ENSG00000196167 | COLCA1 | NK cell | MCPCOUNTER | 5.203e-03 | 0.3126 | plot |
| ACC | ENSG00000196167 | COLCA1 | Myeloid dendritic cell | MCPCOUNTER | 4.843e-03 | 0.3151 | plot |
| ACC | ENSG00000196167 | COLCA1 | T cell CD4+ effector memory | XCELL | 3.345e-04 | 0.3934 | plot |
| ACC | ENSG00000196167 | COLCA1 | Cancer associated fibroblast | XCELL | 1.137e-04 | 0.4206 | plot |
| ACC | ENSG00000196167 | COLCA1 | Mast cell | XCELL | 2.058e-03 | 0.3417 | plot |
| ACC | ENSG00000196167 | COLCA1 | T cell NK | XCELL | 3.156e-04 | 0.3978 | plot |
| ACC | ENSG00000196167 | COLCA1 | T cell CD4+ Th1 | XCELL | 2.507e-03 | -0.3355 | plot |
| ACC | ENSG00000196167 | COLCA1 | T cell CD4+ Th2 | XCELL | 3.126e-03 | -0.3284 | plot |
| ACC | ENSG00000196167 | COLCA1 | T cell regulatory (Tregs) | XCELL | 1.326e-03 | 0.355 | plot |
| ACC | ENSG00000196167 | COLCA1 | stroma score | XCELL | 1.263e-03 | 0.3584 | plot |
| ACC | ENSG00000196167 | COLCA1 | microenvironment score | XCELL | 9.076e-04 | 0.3682 | plot |
| ACC | ENSG00000196273 | LINC00523 | Monocyte | QUANTISEQ | 6.487e-03 | 0.3038 | plot |
| ACC | ENSG00000196295 | AC005154.6 | T cell CD4+ central memory | XCELL | 5.879e-03 | 0.3073 | plot |
| ACC | ENSG00000196295 | AC005154.6 | Monocyte | XCELL | 5.968e-03 | 0.3067 | plot |
| ACC | ENSG00000196295 | AC005154.6 | T cell NK | XCELL | 6.977e-03 | 0.3023 | plot |
| ACC | ENSG00000196295 | AC005154.6 | microenvironment score | XCELL | 3.248e-03 | 0.3286 | plot |
| ACC | ENSG00000196366 | C9orf163 | Macrophage M1 | CIBERSORT | 2.407e-03 | -0.3368 | plot |
| ACC | ENSG00000196366 | C9orf163 | Myeloid dendritic cell activated | CIBERSORT | 2.079e-03 | 0.3414 | plot |
| ACC | ENSG00000196366 | C9orf163 | Macrophage M1 | CIBERSORT-ABS | 2.069e-03 | -0.3415 | plot |
| ACC | ENSG00000196366 | C9orf163 | Macrophage M2 | CIBERSORT-ABS | 4.216e-03 | -0.3199 | plot |
| ACC | ENSG00000196366 | C9orf163 | Myeloid dendritic cell activated | CIBERSORT-ABS | 4.090e-03 | 0.3196 | plot |
| ACC | ENSG00000196366 | C9orf163 | cytotoxicity score | MCPCOUNTER | 3.237e-04 | -0.3971 | plot |
| ACC | ENSG00000196366 | C9orf163 | NK cell | MCPCOUNTER | 4.153e-03 | -0.3204 | plot |