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CellCluster
A fast tool to visualize detailed distribution of cell subpopulations in different clusters.
Datasets:
ACC_GSE113660(Chen W, et al. Genome Biol. 2018)
AEL_GSE142213(Di Genua C, et al. Cancer Cell 2020)
ALL_GSE132509(Caron M, et al. Sci Rep 2020)
ALL_GSE83142(Ebinger S. Cancer Cell. 2016)
AML_GSE116256(De Bie J, et al. Leukemia 2018)
AML_GSE147989(NA)
BLCA_GSE130001(Wang L, et al. Genome Med 2020)
BLCA_GSE145281_aPDL1(Yuen KC, et al. Nat Med 2020)
BP_GSE167118_BALF_moderate(Zhao Z, et al.2021)
BP_GSE167118_BALF_no(Zhao Z, et al.2021)
BP_GSE167118_blood_moderate(Zhao Z, et al.2021)
BP_GSE167118_blood_no(Zhao Z, et al.2021)
BRCA_GSE106202(Arindam Banerjee.Oncotarget. 2018)
BRCA_GSE110686(Savas P, et al. Nat Med 2018)
BRCA_GSE114727_10X(Azizi E, et al. Cell 2018)
BRCA_GSE114727_inDrop(Azizi E, et al. Cell 2018)
BRCA_GSE136206_mouse_aPD1aCTLA4(Hollern DP, et al. Cell 2019)
BRCA_GSE138536(Gulati GS, et al. Science 2020)
BRCA_GSE143423(Weilin Jin, et al.)
BRCA_GSE75688(Chung W, et al. Nat Commun. 2017)
BRCA_GSE77308(Braune EB, et al. Stem Cell Reports. 2016)
BRCA_SRP114962(Kim C, et al. Cell 2018)
CESC_ERP020478(Aaron TL Lun, et al. Nucleic Acids Res. 2018)
CHOL_GSE125449_aPD1aPDL1aCTLA4(Lichun Ma, et al. Cancer Cell 2019)
CLL_GSE111014(Rendeiro AF, et al. Nat Commun 2020)
CML_GSE65525(Klein AM. Cell. 2015)
CML_GSE76312(Giustacchini A, et al. Nat Med. 2017)
CML_GSE98734(Attar M, et al. Sci Rep. 2018)
COVID19_GSE154567_moderate(Yao C, et al.2020)
COVID19_GSE154567_recovery(Yao C, et al.2020)
COVID19_GSE154567_severe(Yao C, et al.2020)
COVID19_GSE166992(Yegnasubramanian S, et al.2021)
COVID19_GSE167118_BALF_moderate(Zhao Z, et al.2021)
COVID19_GSE167118_BALF_severe(Zhao Z, et al.2021)
COVID19_GSE167118_blood_moderate(Zhao Z, et al.2021)
COVID19_GSE167118_blood_severe(Zhao Z, et al.2021)
COVID19_GSE168212(Wang Y, et al.2021)
COVID19_GSE169503(Gangaev A, et al.)
CRC_GSE108989(Zhang L, et al. Nature 2018)
CRC_GSE112865_mouse_aPD1(Arlauckas SP, et al. Theranostics 2018)
CRC_GSE120909_mouse_aPD1(Wang B, et al. Sci Immunol 2018)
CRC_GSE122969_mouse_aPD1aTIM3(Kurtulus S, et al. Immunity 2019)
CRC_GSE139555(Wu TD, et al. Nature 2020)
CRC_GSE144735(Lee HO, et al.Nat Genet. 2020)
CRC_GSE146771_Smartseq2(Zhang L, et al. Cell 2020)
CRC_GSE81861(Li H, et al. Nat Genet. 2017)
ESCA_GSE81812(Ling Yang, et al. Cancer Lett. 2018)
GBM_GSE131928_10X(Neftel C, et al. Cell 2019)
GBM_GSE131928_Smartseq2(Neftel C, et al. Cell 2019)
GBM_GSE135437(Sankowski R, et al. Nat Neurosci 2019)
GBM_GSE138794(Wang L, et al. Cancer Discov 2019)
GBM_GSE139448(Wang R, et al. Stem Cell Reports 2020)
GBM_GSE157424(NA)
GBM_GSE57872_CellLine(Patel AP, et al. Science. 2014)
GBM_GSE57872_tissue(Patel AP, et al. Science. 2014)
GBM_GSE84465(Darmanis S, et al. Cell Rep 2017)
HCL_GSE134355_AdultAdipose1(Han X, et al.)
HCL_GSE134355_AdultAdrenalGland2(Han X, et al.)
HCL_GSE134355_AdultAdrenalGland3(Han X, et al.)
HCL_GSE134355_AdultArtery1(Han X, et al.)
HCL_GSE134355_AdultAscendingColon1(Han X, et al.)
HCL_GSE134355_AdultBladder1(Han X, et al.)
HCL_GSE134355_AdultBladder2(Han X, et al.)
HCL_GSE134355_AdultBoneMarrow1(Han X, et al.)
HCL_GSE134355_AdultBoneMarrow2(Han X, et al.)
HCL_GSE134355_AdultCerebellum1(Han X, et al.)
HCL_GSE134355_AdultCervix1(Han X, et al.)
HCL_GSE134355_AdultDuodenum1(Han X, et al.)
HCL_GSE134355_AdultEpityphlon1(Han X, et al.)
HCL_GSE134355_AdultEsophagus1(Han X, et al.)
HCL_GSE134355_AdultEsophagus2(Han X, et al.)
HCL_GSE134355_AdultFallopiantube1(Han X, et al.)
HCL_GSE134355_AdultGallbladder1(Han X, et al.)
HCL_GSE134355_AdultGallbladder2(Han X, et al.)
HCL_GSE134355_AdultHeart1(Han X, et al.)
HCL_GSE134355_AdultHeart2(Han X, et al.)
HCL_GSE134355_AdultIleum2(Han X, et al.)
HCL_GSE134355_AdultJejunum2(Han X, et al.)
HCL_GSE134355_AdultKidney2(Han X, et al.)
HCL_GSE134355_AdultKidney3(Han X, et al.)
HCL_GSE134355_AdultKidney4(Han X, et al.)
HCL_GSE134355_AdultLiver1(Han X, et al.)
HCL_GSE134355_AdultLiver2(Han X, et al.)
HCL_GSE134355_AdultLiver4(Han X, et al.)
HCL_GSE134355_AdultLung1(Han X, et al.)
HCL_GSE134355_AdultLung2(Han X, et al.)
HCL_GSE134355_AdultLung3(Han X, et al.)
HCL_GSE134355_AdultMuscle1(Han X, et al.)
HCL_GSE134355_AdultOmentum1(Han X, et al.)
HCL_GSE134355_AdultOmentum2(Han X, et al.)
HCL_GSE134355_AdultOmentum3(Han X, et al.)
HCL_GSE134355_AdultPancreas1(Han X, et al.)
HCL_GSE134355_AdultPeripheralBlood1(Han X, et al.)
HCL_GSE134355_AdultPeripheralBlood2(Han X, et al.)
HCL_GSE134355_AdultPeripheralBlood3(Han X, et al.)
HCL_GSE134355_AdultPeripheralBlood4(Han X, et al.)
HCL_GSE134355_AdultPleura1(Han X, et al.)
HCL_GSE134355_AdultProstate1(Han X, et al.)
HCL_GSE134355_AdultRectum1(Han X, et al.)
HCL_GSE134355_AdultSigmoidColon1(Han X, et al.)
HCL_GSE134355_AdultSpleen1(Han X, et al.)
HCL_GSE134355_AdultStomach1(Han X, et al.)
HCL_GSE134355_AdultStomach2(Han X, et al.)
HCL_GSE134355_AdultStomach3(Han X, et al.)
HCL_GSE134355_AdultTemporalLobe1(Han X, et al.)
HCL_GSE134355_AdultThyroid1(Han X, et al.)
HCL_GSE134355_AdultThyroid2(Han X, et al.)
HCL_GSE134355_AdultTrachea2(Han X, et al.)
HCL_GSE134355_AdultTransverseColon1(Han X, et al.)
HCL_GSE134355_AdultTransverseColon2(Han X, et al.)
HCL_GSE134355_AdultUreter1(Han X, et al.)
HCL_GSE134355_AdultUterus1(Han X, et al.)
HCL_GSE134355_ChorionicVillus1(Han X, et al.)
HCL_GSE134355_CordBlood1(Han X, et al.)
HCL_GSE134355_CordBlood2(Han X, et al.)
HCL_GSE134355_CordBloodCD34P1(Han X, et al.)
HCL_GSE134355_CordBloodCD34P2(Han X, et al.)
HCL_GSE134355_FetalAdrenalGland2(Han X, et al.)
HCL_GSE134355_FetalAdrenalGland3(Han X, et al.)
HCL_GSE134355_FetalAdrenalGland4(Han X, et al.)
HCL_GSE134355_FetalBrain3(Han X, et al.)
HCL_GSE134355_FetalBrain4(Han X, et al.)
HCL_GSE134355_FetalBrain5(Han X, et al.)
HCL_GSE134355_FetalBrain6(Han X, et al.)
HCL_GSE134355_FetalCalvaria1(Han X, et al.)
HCL_GSE134355_FetalEyes1(Han X, et al.)
HCL_GSE134355_FetalFemaleGonad1(Han X, et al.)
HCL_GSE134355_FetalFemaleGonad2(Han X, et al.)
HCL_GSE134355_FetalHeart1(Han X, et al.)
HCL_GSE134355_FetalHeart2(Han X, et al.)
HCL_GSE134355_FetalIntestine1(Han X, et al.)
HCL_GSE134355_FetalIntestine2(Han X, et al.)
HCL_GSE134355_FetalIntestine3(Han X, et al.)
HCL_GSE134355_FetalIntestine4(Han X, et al.)
HCL_GSE134355_FetalIntestine5(Han X, et al.)
HCL_GSE134355_FetalKidney3(Han X, et al.)
HCL_GSE134355_FetalKidney4(Han X, et al.)
HCL_GSE134355_FetalKidney5(Han X, et al.)
HCL_GSE134355_FetalKidney6(Han X, et al.)
HCL_GSE134355_FetalLiver1(Han X, et al.)
HCL_GSE134355_FetalLung1(Han X, et al.)
HCL_GSE134355_FetalLung2(Han X, et al.)
HCL_GSE134355_FetalMaleGonad1(Han X, et al.)
HCL_GSE134355_FetalMaleGonad2(Han X, et al.)
HCL_GSE134355_FetalMuscle1(Han X, et al.)
HCL_GSE134355_FetalPancreas1(Han X, et al.)
HCL_GSE134355_FetalPancreas2(Han X, et al.)
HCL_GSE134355_FetalPancreas3(Han X, et al.)
HCL_GSE134355_FetalRib2(Han X, et al.)
HCL_GSE134355_FetalRib3(Han X, et al.)
HCL_GSE134355_FetalSkin2(Han X, et al.)
HCL_GSE134355_FetalSkin3(Han X, et al.)
HCL_GSE134355_FetalSpinalCord1(Han X, et al.)
HCL_GSE134355_FetalStomach1(Han X, et al.)
HCL_GSE134355_FetalStomach2(Han X, et al.)
HCL_GSE134355_FetalThymus1(Han X, et al.)
HCL_GSE134355_FetalThymus2(Han X, et al.)
HCL_GSE134355_hESC1(Han X, et al.)
HCL_GSE134355_NeonatalAdrenalGland1(Han X, et al.)
HCL_GSE134355_Placenta1(Han X, et al.)
HNSC_GSE103322(Puram SV, et al. Cell 2018)
IPEX_GSE167976(Zemmour D, et al.)
KIRC_GSE111360(Neal JT, et al. Cell 2018)
KIRC_GSE145281_aPDL1(Yuen KC, et al. Nat Med 2020)
KIRC_GSE73121(Kim KT, et al. Genome Biol. 2016)
LGG_GSE102130(Filbin MG, et al. Science 2018)
LGG_GSE103224(Yuan J, et al. Genome Med 2018)
LGG_GSE141982(Wang L, et al. Bioinformatics 2020)
LGG_GSE70630(Tirosh I, et al. Nature 2016)
LGG_GSE89567(Venteicher AS, et al. Science 2017)
LIHC_GSE107747(D.Avola D, et al.)
LIHC_GSE125449_aPDL1aCTLA4(Ma L, et al.Cancer Cell 2019)
LIHC_GSE140228_Smartseq2(Zhang Q, et al. Cell 2019)
LIHC_GSE98638(Zheng C, et al. Cell 2017)
LUAD_DRP001358(Suzuki A, et al. Genome Biol. 2015)
LUAD_DRP003337(Tsukasa Kouno, et al.Nat Commun. 2019)
LUAD_GSE69405(Kim KT, et al. Genome Biol. 2015)
Lymphoma_GSE124899(Borcherding N, et al.)
MB_GSE119926(Hovestadt V, et al. Nature 2019)
MCC_GSE117988_aPD1aCTLA4(Paulson KG, et al. Nat Commun 2018)
MCC_GSE118056_aPDL1(Paulson KG, et al. Nat Commun 2018)
MEL_GSE157743(Hong X, et al.Cancer Discov. 2020)
MEL_GSE99330(Torre E, et al. Cell Syst. 2018)
MM_GSE110499_10X(Fan J, et al. Genome Res. 2018)
MM_GSE110499_Smart(Fan J, et al. Genome Res. 2018)
MM_GSE117156(Ledergor G, et al. Nat Med 2018)
MM_GSE141299(NA)
NET_GSE140312(Rao M, et al. Cold Spring Harb Mol Case Stud 2020)
NHL_GSE128531(Gaydosik AM, et al. Clin Cancer Res 2019)
NSCLC_DRP003981(Yukie Kashima, et al. Scientific Report. 2018)
NSCLC_EMTAB6149(Lambrechts D, et al. Nat Med 2018)
NSCLC_GSE117570(Song Q, et al. Cancer Med 2019)
NSCLC_GSE127465(Zilionis R, et al. Immunity 2019)
NSCLC_GSE127471(Newman AM, et al. Nat Biotechnol 2019)
NSCLC_GSE143423(Wang L, et al.)
NSCLC_GSE99254(Guo X, et al. Nat Med 2018)
OV_GSE115007(Tang-Huau TL, et al. Nat Commun 2018)
OV_GSE118828(Shih AJ, et al. PLoS One 2018)
OV_GSE85534(Guillaumet-Adkins A. Genome Biol. 2017)
PAAD_GSE112845(Chen J, et al. J Transl Med. 2018)
PBMC_30K_10X(NA)
PBMC_8K_10X(NA)
PC_GSE67980(Miyamoto DT. Science. 2015)
PDAC_GSE111672(Moncada R, et al. Nat Biotechnol 2020)
PRAD_GSE99795(Horning AM, et al. Cancer Res. 2018)
SARC_GSE119352_mouse_aPD1aCTLA4(Gubin MM, et al. Cell 2018)
SARC_GSE146221_CHLA10(Miller HE, et al. Cancers)
SARC_GSE146221_CHLA9(Miller HE, et al. Cancers)
SARC_GSE146221_TC71(Miller HE, et al. Cancers)
SCC_GSE123813_aPD1(Yost KE, et al. Nat Med 2019)
SKCM_GSE115978_aPD1(Jerby-Arnon L, et al. Cell 2018)
SKCM_GSE120575_aPD1aCTLA4(Sade-Feldman M, et al. Cell 2018)
SKCM_GSE123139(Li H, et al. Cell 2019)
SKCM_GSE139249(de Andrade LF, et al. JCI Insight 2019)
SKCM_GSE148190(NA)
SKCM_GSE72056(Tirosh I, et al. Science 2016)
SKCM_GSE81383(Gerber T, et al. Oncotarget. 2017)
SLE_GSE142016(Mistry P, et al.)
STAD_GSE134520(Zhang P, et al. Cell 2019)
TNBC(Wu, et al. EMBO J. 2020)
TNBC_GSE148673(NA)
UCEC_GSE139555(Wu TD, et al. Nature 2020)
Type:
Cluster
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(Resolution):
Coordinates:
umap
tSNE
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