Welcome to stSNV!


stSNV: a comprehensive resource of SNVs in spatial transcriptome.

stSNV provides a versatile resource of somatic SNVs (single nucleotide variants) at spatial transcriptomics resolution, involving 42,202 genes in 730,067 spots, covering 36 diseases and 39 normal tissues. Based on a large spatial multicellular dataset, stSNV performs multilevel analyses to provide insights into the spatial variation function in different types of human and mouse tissues, and user-friendly comprehensive analysis tools were equipped in the database.

stSNV Highlights

stSNV constructed a comprehensive Spot-SNVs Count Matrix for human tissues, revealing mutational clusters and their unique characteristics, exploring the profound impact of SNVs on gene expression, showcasing the co-localization between SNVs and cells, and screening for key SNVs in spatial communication.

Spot-SNVs Matrix

Mutational Clusters

Mutational Signatures of Clusters

SNVs-Expression Perturbation

SNVs-Cell Co-localization

SNVs-Spatial Communication

stSNV Data overview

56

Datasets

450

Slices

730,067

Spots

42,202

Mutated genes

898,908

SNVs